Nos tutelles
Publications 2017
Albuquerque EVS, Petitot AS , da Silva JP, Grossi-de-Sa MF, Fernandez D . (2017). Early responses of coffee immunity-related genes to root-knot nematode infection. Physiological and Molecular Plant Pathology. 100: 142-150. doi.org/10.1016/j.pmpp.2017.09.001
Ali N, Tavoillot J, Besnard G, Khadari B, Dmowska E, Winiszewska G, Fossati-Gaschignard O, Ater M, Ait Hamza M, El Mousadik A, El Oualkadi A, Moukhli A, Essalouh L, El Bakkali A, Chapuis E , Mateille T. (2017). How anthropogenic changes may affect soil-borne parasite diversity? Plant-parasitic nematode communities associated with olive trees in Morocco as a case study. BMC Ecol. Feb 6;17(1):4. doi: 10.1186/s12898-016-0113-9.
Alves GSC, Torres LF, Dechamp E, breitler JC , Joet T, Gatineau F, Andrade AC, Bertrand B, Marraccini P, Etienne H . (2017). Differential fine-tuning of gene expression regulation in coffee leaves by CcDREB1D promoter haplotypes under water deficit. J of Exp Botany. 68(11): 3017-3031. DOI: 10.1093/jxb/erx166
Blanvillain-Baufumé S, Reschke M, Solé M, Auguy F, Doucouré H, Szurek B , Meynard D, Portefaix M, Cunnac S , Guiderdoni E, Boch J, Koebnik R . (2017). Targeted promoter editing for rice resistance to Xanthomonas oryzae pv. oryzae reveals differential activities for SWEET14-inducing TAL effectors. Plant Biotechnol J. 2017 Mar;15(3):306-317. doi: 10.1111/pbi.12613.
Bournaud C, Moulin L, Cnockaert M, Faria S, Prin Y, Severac D, Vandamme P. (2017). Paraburkholderia piptadeniae sp. nov. and Paraburkholderia ribeironis sp. nov., two root-nodulating symbiotic species of Piptadenia gonoacantha in Brazil. Int J Syst Evol Microbiol. 017 Feb;67(2):432-440. doi: 10.1099/ijsem.0.001648.
Cacas JL, Pré M, Cissoko M, Diedhiou I, Jalloul A, Doumas P, Nicole M , Champion A. (2017). GhERF-IIb3 regulates the accumulation of jasmonate and leads to enhanced cotton resistance to blight disease. Mol Plant Pathol.18(6) : 825-836 DOI: 10.1111/mpp.12445
Campa C , Urban L, Mondolot L, Fabre D, Roques S, Lizzi Y, Aarrouf J, Doulbeau S, Breitler JC , Letrez C, Toniutti L, Bertrand B , La Fisca P, Bidel LPR, Etienne H . (2017). Juvenile coffee leaves acclimated to low light are unable to cope with a moderate light increase. Frontiers in Plant Science, 2017, 8, p. art. 1126 [16 p.]. DOI : 10.3389/fpls.2017.01126
Chapuis E , Lamy T, Pointier JP, Juillet N, Segard A, Jarne P, David P. (2017). Bioinvasion triggers rapid evolution of life histories in freshwater snails. American Naturalist. 190 (5): 694-706. doi.org/10.1086/693854
Cohen, SP, Liu, H, Argues, CT, Pereira, A, Vera Cruz, C, Verdier, V , Leach, JE. (2017). RNA-Seq analysis reveals insight into enhanced rice Xa7-mediated bacterial blight resistance at high temperature. Plos one. 12(11). DOI: 10.1371/journal.pone.0187625
Dall'Agnol RF, Bournaud C, de Faria SM, Béna G, Moulin L , Hungria. (2017). Genetic diversity of symbiotic Paraburkholderia species isolated from nodules of Mimosa pudica (L.) and Phaseolus vulgaris (L.) grown in soils of the Brazilian Atlantic Forest (Mata Atlântica). FEMS Microbiol Ecol. DOI: 10.1093/femsec/fix027
Diagne N, Swanson E, Pesce C, Fall F, Bakhoum N, Nidgue Faye M, Simpson S, Morris K, Thomas WK, Moulin L , Diouf D, Tisa LS (2017). Permanent Draft Genome Sequence of Ensifer sp. Strain LCM 4579, a Salt-Tolerant, Nitrogen-Fixing Bacterium Isolated from Senegalese Soil. Genome Announc. DOI: 10.1128/genomeA.00117-17
Diagne N, Swanson E, Pesce C, Fall F, Diouf F, Bakhoum N, Fall D, Nidgue Faye M, Oshone R, Simpson S, Morris K, Thomas WK, Moulin L , Diouf D, Tisa LS. (2017). Permanent Draft Genome Sequence of Rhizobium sp. Strain LCM 4573, a Salt-Tolerant, Nitrogen- Fixing Bacterium Isolated from Senegalese Soils. Genome Announc. DOI: 10.1128/genomeA.00285-17
Dupeyron M, de Souza RF, Hamon P, de Kochko A, Crouzillat D, Couturon E, Domingues DS, Guyot R. (2017). Distribution of Divo in Coffea genomes, a poorly described family of angiosperm LTR-Retrotransposons. Molecular Genetics Genomics. Doi: 10.1007/s00438-017-1308-2
El Adouzi M, Bonato O , Roy L. (2017). Detecting pyrethroid resistance in predatory mites inhabiting soil and litter: an in vitro test. Pest Management Science. 73(6): 1258-1266. DOI: 10.1002/ps.4454
Garcia-Seco D, Chiapello M, Bracale M, Pesce C, Bagnaresi P, Dubois E, Moulin L , Vannini C, Koebnik R .(2017). Transcriptome and proteome analysis reveal new insight into proximal and distal responses of wheat to foliar infection by Xanthomonas translucens. Scientific Reports. DOI:10.1038/s41598-017-10568-8
Georget F , Courtel P, Garcia EM, Hidalgo M, Alpizar E, Breitler JC, Bertrand B, Etienne H. (2017). Somatic embryogenesis-derived coffee plantlets can be efficiently propagated by horticultural rooted mini-cuttings: A boost for somatic embryogenesis. Science Horticulturae. 216: 177-185. DOI: 10.1016/j.scienta.2016.12.017
Godefroid M, Tixier P, Chabrier C, Djigal D, Queneherve P. (2017). Associations of soil type and previous crop with plant-feeding nematode communities in plantain agrosystems. Applied Soil Ecology, 113 :63-70. DOI: doi.org/10.1016/j.apsoil.2017.01.012
Guinard J, Latreille A, Guerin F, Poussier S, Wicker E . (2017). New Multilocus Variable-Number Tandem-Repeat Analysis (MLVA) Scheme for Fine-Scale Monitoring and Microevolution-Related Study of Ralstonia pseudosolanacearum Phylotype I Populations. Applied and Environmental Microbiology. 85(4). DOI: 10.1128/AEM.03095-16
Hamon P, Grover CE, Davis AP, Rakotomalala JJ, Raharimalala NE, Albert VA, Sreenath HL, Stoffelen P, Mitchell SE, Couturon E, Hamon S, de Kochko A, Crouzillat D, Rigoreau M, Sumirat U, Akaffou S, Guyot R. (2017). Genotyping by sequencing provides the first well-resolved phylogeny for coffee (Coffee) and insights into the evolution of caffeine content in its species: GBS coffee phylogeny and the evolution of caffeine content. Mol Phylogenet Evol. 2017 Feb 16;109:351-361. doi: 10.1016/j.ympev.2017.02.009. [Epub ahead of print]
Jacobs JM, Pesce C, Vancheva T, Bini F, Butchacas J, Hensel G, Otto I, Szurek B , Kumlehn, J, Braggard C, Koebnik R. (2017). Live visualization of Type III effector activity in stomata and mesophyll cells by Xanthomonas translucens during leaf infection. Phytopathology. 107(12): 86-86 S.
Jacobs JM, Vancheva T, Cerutti A, Lang JM, Pesce C, Noel L, Allen C, Leach JE, Szurek B, Cunnac S , Braggard CG, Koebnik R . (2017). Evolutionary and biological basis of Xanthomonas systemic pathogenesis of plants. Phytopathology. 107(2): 86-86 S.
Joffard N, Legendre L, Gibernau M, Pascal L . (2017). Differential Accumulation of Volatile Organic Compounds by Leaves and Roots of Two Guianese Philodendron Species, P. fragrantissimum Kunth and P.melinonii Brongn. Chemistry & Biodiversity, 14 (4). DOI : 10.1002/cbdv.201600415
Kini K, Agnimonhan R, Afolabi O, Milan B, Soglonou B, Gbogbo G, Koebnik R , Silue D. (2017). First report of a new bacterial leaf blight of rice caused by Pantoea ananatis and Pantoea stewartii in Benin.Plant Disease. 101(1) : 242
Kini TK, Agnimonhan, Afolabi O, Soglonou B, Silue D, Koebnik R . (2017). First report of a new bacterial leaf blight of rice caused by Pantoea ananatis and Pantoea stewartii in Togo. Plant Disease, 2017, 101 (1), p. 241-242. http://dx.doi.org/10.1094/PDIS-06-16-0939-PDN
Klonowska A , López-López A, Moulin L , Ardley J, Gollagher M, Marinova D, Tian R, Huntemann M, Reddy TB, Varghese N, Woyke T, Markowitz V, Ivanova N, Seshadri R, Baeshen MN, Baeshen NA, Kyrpides N, Reeve W. (2017). High-quality draft genome sequence of Rhizobium mesoamericanum strain STM6155, a Mimosa pudica microsymbiont from New Caledonia. Stand Genomic Sci. DOI: 10.1186/s40793-016-0212-4
Koala M, Traoré VSE, Sérémé D, Neya BJ, Brugidou C, Barro N, Traoré O. (2017). Imperata yellow mottle virus: An Emerging Threat to Maize, Sorghum and Pearl Millet in Burkina Faso. Agricultural Sciences, 2017, 8, 397-408. doi.org/10.4236/as.2017.85030
Koita K, Baissac I, Sanon E, Campa C , Sankara P. (2017). Phenolics from Lippia multiflora Moldenke as potential bioactive agents against peanut pathogens. Agricultural Science Research Journal, 7(9): 267-276
Koïta K, Neya F B, Opoku N, Baissac Y, Campa C , Sankara P. (2017). Phytochemical analysis of Ziziphus mucronata Willd. extract and screening for antifungal activity against peanut pathogens, African J. Plant Sci. 11(10): 394-402, DOI: 10.5897/AJPS2017.1600
Langlois PA, Snelling J, Hamilton J, Bragard C, Koebnik R, Verdier V, Triplett L, Blom J, Tisserat N, Leach J. (2017). Characterization of the Xanthomonas translucens complex using draft genomes, comparative genomics, phylogenetic analysis, and diagnostic LAMP assays. Phytopathology. doi.org/10.1094/PHYTO-08-16-0286-R
Little CJ, Chapuis MP, Blondin L, Chapuis E , Jourdan-Pineau H. (2017). Exploring the relationship between tychoparthenogenesis and inbreeding depression in the Desert Locust, Schistocerca gregaria. Ecology and Evolution. 7(15): 6003-6011. DOI: 10.1002/ece3.3103
Longué RDS, Galzi-Pinel A , Zinga I, Semballa S, Fargette D , Barro N, Traoré O. (2017). Genetic diversity and molecular epidemiology of rice yellow mottle virus in Central African Republic. International Journal of Virology. 13(2): 80-89. DOI: 10.3923/ijv.2017
Mantelin S, Bellafiore S , Kyndt T. (2017). Meloidogyne graminicola: a major threat to rice agriculture. Mol Plant Pathol. 2017 Jan;18(1):3-15. doi: 10.1111/mpp.12394
Medina CA, Reyes PA, Trujillo CA, Gonzalez J.L., Bejarano DA, Montenegro NA, Jacobs JM , Joe A, Restrepo S, Alfano JR, Bernal AJ. (2017). The role of type three effectors from Xanthomonas axonopodis pv. manihotis in virulence and suppression of plant immunity. Mol Plant Pathol. DOI: 10.1111/mpp.12545
Mohamad R, Maynaud G, Le Quéré A, Vidal C, Klonowska A , Yashiro E, Cleyet-Marel JC, Brunel B. (2017). Ancient heavy metal contamination in soils as a driver of tolerant Anthyllis vulneraria rhizobial communities. Appl Environ Microbiol. 83(2). DOI: 10.1128/AEM.01735-16
Moury B, Fabre F, Hebrard E , Froissart R. (2017). Determinants of host species range in plant viruses. J. Gen Virol. 98(4): 862-873. doi: 10.1099/jgv.0.000742
Nagel R, Turrini P, Nett R, Leach J, Verdier V , Van Sluys MA, Peters R. (2017). An operon for production of bioactive gibberellin A4 phytohormone with wide distribution in the bacterial rice leaf streak pathogen Xanthomonas oryzae pv. oryzicola. New Phytologist. DOI: 10.1111/nph.14441
Ndikumana I, Pinel-Galzi A, Fargette D, Hébrard E. (2017) Complete Genome Sequence of a New Strain of Rice yellow mottle virus from Malawi, Characterized by a Recombinant VPg Protein. Genome Announcements 5(44). pii: e01198-17. doi: 10.1128/genomeA.01198-17.
Pérez-Quintero AL, Lamy L, Zarate CA, Cunnac S , Doyle EL, Bogdanove AJ, Szurek B , Derepeer A. (2017). daTALbase: a database for genomic and transcriptomic data related to TAL effectors. Mol Plant Microbr Interact. DOI: 10.1094/MPMI-06-17-0153-FI
Pesce C, Jacobs JM, Berthelot E, Perret M, Vancheva T, Bragard C, Koebnik R. (2017). Comparative Genomics Identifies a Novel Conserved Protein, HpaT, in Proteobacterial Type III Secretion Systems that Do Not Possess the Putative Translocon Protein HrpF. Frontiers in Microbiology. Vol. 8. DOI: 10.3389/fmicb.2017.01177
Petitot AS , Kyndt T, Haidar R, Dereeper A , Collin M, de Almeida Engler J, Gheysen G, Fernandez D. (2017). Transcriptomic and histological responses of African rice (Oryza glaberrima) to Meloidogyne graminicola provide new insights into root-knot nematode resistance in monocots. Ann Bot. DOI: 10.1093/aob/mcw256
Pidon H, Guesquière A, Chéron S, Issaka S, Hebrard E , Sabot F, Kolade O, Silué D, Albar L. (2017). Fine mapping of RYMV3: a new resistance gene to Rice yellow mottle virus from Oryza glaberrima. Theoretical and Applied genetics. 130(4): 807-818.doi: 10.1007/s00122-017-2853-0
Roy L, El Adouzi M, Moraza ML, Chiron G, de Janti EV, Le Peutrec G, Bonato O. (2017). Arthropod communities of laying hen houses: An integrative pilot study toward conservation biocontrol of the poultry red mite Dermanyssus gallinae. Biological Control. 114: 176-194. DOI : 0.1016/j.biocontrol.2017.08.006
Salgon S, Jourda C, Sauvage C, Daunay MC, Reynaud B, Wicker E , Dintinger J. (2017). Eggplant Resistance to the Ralstonia solanacearum Species Complex Involves Both Broad-Spectrum and Strain-Specific Quantitative Trait Loci. Frontiers in Plant Science. DOI: 10.3389/fpls.2017.00828
Tall H, Noba K, Szurek B, Cunnac S , Tekete C, Verdier VM . (2017). Report and characterization of bacterial diseases caused by Xanthomonas oryzae in Senegal. Phytopathology. 107(2): 101-101 S.
Tollenaere C, Lacombe S , Wonni I, Barro M, Ndougonna C, Gnacko F, Sérémé D, Jacobs JM, Hebrard E, Cunnac S, Brugidou C. (2017). Virus-Bacteria Rice Co-Infection in Africa: Field Estimation, Reciprocal Effects, Molecular Mechanisms, and Evolutionary Implications. Frontiers in Plant Science, doi.org/10.3389/fpls.2017.00645
Toniutti L, Breitler JC, Etienne H, Campa C , Doulbeau S, Urban L, Lambot C, Pinilla JH, Bertrand B. (2017). Influence of Environmental Conditions and Genetic Background of Arabica Coffee (C. arabica L) on Leaf Rust (Hemileia vastatrix) Pathogenesis. Front. Plant Sci. DOI: 10.3389/fpls.2017.02025
Wang L, Rinaldi FC, Singh P, Doyle EL, Dubrow ZE, Tran TT, Pérez-Quintero AL, Szurek B , Bogdanove AJ. (2017). TAL Effectors Drive Transcription Bidirectionally in Plants. Mol Plant. 2017, 10(2):285-296. doi: 10.1016/j.molp.2016.12.002.
Zuluaga, P, Szurek B, Koebnik R , Kroj T, Morel JB. (2017). Effector mimics and integrated decoys, the never-ending arms race between rice and Xanthomonas oryzae . Front Plant Sci 8: 431.DOI: 10.3389/fpls.2017.00431
