Nos tutelles
Publications 2020
Awada R , Verdier D, Froger S, Brulard E, de Faria Maraschin S, Etienne H and Breton D (2020) An innovative automated active compound screening system allows high-throughput optimization of somatic embryogenesis in Coffea arabica. Sci Rep 10:810. doi: 10.1038/s41598-020-57800-6 https://www.nature.com/articles/s41598-020-57800-6
Bangratz M , Wonni I, Kini K, Sondo M, Brugidou C, Béna G , Gnacko F, Barro M, Koebnik R , Silué D, Tollenaere C. (2020). Design of a new multiplex PCR assay for rice pathogenic bacteria detection and its application to infer disease incidence and detect co-infection in rice fields in Burkina Faso. PLoS One. DOI: 10.1371/journal.pone.0232115
Breitler JC , Djerrab D, Leran S, Toniutti L, Guittin C, Severac D, Pratlong M, Dereeper A, Etienne H, Bertrand B. (2020). Full moonlight-induced circadian clock entrainment in Coffea arabica. BMC Plant Biol. doi: 10.1186/s12870-020-2238-4.
Brunel C, Da Silva AMF, Gros R. (2020). Environmental Drivers of Microbial Functioning in Mediterranean Forest Soils. DOI: 10.1007/s00248-020-01518-5
Brunel C, Pouteau R, Dawson W, Pester M, Ramirez KS, Van Kleunen M. (2020). Towards Unraveling Macroecological Patterns in Rhizosphere Microbiomes. DOI: 10.1016/j.tplants.2020.04.015
Canto CD, Simonin M, King E, Moulin L, Bennet MJ, Castrillo G, Laplaze L. (2020). An extended root phenotype: the rhizosphere, its formation and impacts on plant fitness. Plant J. DOI: 10.1111/tpj.14781
Caradonia F, Ronga D, Fiore A, Barbieri R, Moulin L , Terzi V, Francia E. (2020). Biostimulants and cherry rootstock increased tomato fruit yield and quality in sustainable farming systems. Italian Journal of Agronomy. 15(2): 121-131. DOI: 10.4081/ija.2020.1553
Cohen SP, Luna EK, Lang JM, Chang C, Leach JE, Le-Saux MF, Portier P, Koebnik R , Jacobs JM. (2020). High-Quality Genome Resource of Xanthomonas hyacinthi Generated via Long-Read Sequencing. Plant Dis. DOI: 10.1094/PDIS-11-19-2393-A
Couttolenc-Brenis E, Carrion GL, Villain L , Ortega-Escalona F, Ramirez-Martinez D, Mata-Rosas M, Mendez-Bravo A. (2020). Prehaustorial local resistance to coffee leaf rust in a Mexican cultivar involves expression of salicylic acid-responsive genes. Peerj, 8. doi.org/10.7717/peerj.
de la Fuente Cantó C, Simonin M, King E, Moulin L , Bennett MJ, Castrillo G, Laplaze L. (2020). An extended root phenotype: the rhizosphere, its formation and impacts on plant fitness. Plant J. DOI: 10.1111/tpj.14781
Di Mattia J, Ryckebusch F, Vernere MS, Pirolles E, Sauvion N, Peterschmitt M, Zeddam JL , Blanc S. (2020). Co-Acquired Nanovirus and Geminivirus Exhibit a Contrasted Localization within Their Common Aphid Vector. Viruses 2020, 12, 299. doi: 10.3390/v12030299
Di Mattia J, Vernerey MS, Yvon M, Pirolles E, Villegas M, Gaafar Y, Ziebell H, Michalakis Y, Zeddam JL , Blanc S. (2020). Route of a multipartite (nano)virus across the body of its aphid vector. J. Virol. DOI: 10.1128/JVI.01998-19
Dollet M, Fidelis EG, Dos Passos E, Da Silva F, Aberlenc HP, Schurt DA, Bahder B, Diniz LC, Bartlett CR. (2020). Derbid Planthoppers (Hemiptera: Fulgoroidea: Derbidae) Associated with Coconut and Oil Palm in Brazil. Neotropical Entomology. DOI: 10.1007/s13744-020-00788-5.
Dzido JL, Sanchez R, Dollet M , Julia JF, Narvaez M, Fabre S, Oropeza C. (2020). Haplaxius crudus (Hemiptera: Cixiidae) Transmits the Lethal Yellowing Phytoplasmas, 16SrIV, to Pritchardia pacifica Seem. & H.Wendl (Arecaceae) in Yucatan, Mexico. Neotrop Entomol. doi: 10.1007/s13744-020-00799-2.
El Adouzi M, Arriaga-Jimenez A, Dormont L, Barthes N, Labalette A, Lapeyre B, Bonato O , Roy L. (2020). Modulation of feed composition is able to make hens less attractive to the poultry red mite Dermanyssus gallinae. Parasitology, 2020, 147 (2), p. 171-181. https://doi.org/10.1017/s0031182019001379
Hily JM, Poulicard N , Candresse T, Vigne E, Beuve M, Renault L, Velt A, Spilmont AS, Lemaire O. (2020). Datamining, Genetic Diversity Analyses, and Phylogeographic Reconstructions Redefine the Worldwide Evolutionary History of Grapevine Pinot gris virus and Grapevine berry inner necrosis virus. Phytobiomes Journal. 4(2): 165-177. DOI: 10.1094/PBIOMES-10-19-0061-R
Huerta AI, Delorean EE, Bossa-Castro AM, Tonnessen BW, Raghavan C, Corral R, Pérez-Quintero ÁL, Leung H, Verdier V , Leach JE. (2020). Resistance and susceptibility QTL identified in a rice MAGIC population by screening with a minor-effect virulence factor from Xanthomonas oryzae pv. oryzae. Plant Biotechnol J. doi: 10.1111/pbi.13438
Kante M, Flores C, Moufid Y, Wonni I, Hutin M, Thomas E , Fabre S, Gagnevin L , Dagno K, Verdier V, Koita O, Szurek B. (2020). First Report of Xanthomonas phaseoli pv. Manihotis, the causal agent of Cassava bacterial blight, in Mali. Plant Disease. 104(6): 1852-1853. DOI: 10.1094/PDIS-12-19-2611-PDN
Kini K, Lefeuvre P, Poulin L, Silué D, Koebnik R . (2020). Genome Resources of Three West African Strains of Pantoea ananatis Causing Bacterial Blight and Grain Discoloration of Rice. Phytopathology. doi: 10.1094/PHYTO-03-20-0091-A
Klonowska A, Moulin L , Ardley JK, Gollagher MM, Zandberg JD, Marinova DV, Huntemann M, Reddy TBK, Varghese NJ, Woyke T, Ivanona N, Seshadri R, Kyrpides N, Reeve WG. (2020). Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil. BMC Genomics. DOI: 10.1186/s12864-020-6623-z
Lamelas A, Desgarennes D, Lopez-Lima D, Villain L , Alonso-Sanchez A, Artacho A, Latorre A, Moya A, Carrion G. (2020). The Bacterial Microbiome of Meloidogyne-Based Disease Complex in Coffee and Tomato. Front Plant Sci. DOI: 10.3389/fpls.2020.00136
Leran S, Noguero M, Corratge-Faillie C, Boursiac Y, Brachet C, Lacombe B . (2020). Functional Characterization of the Arabidopsis Abscisic Acid Transporters NPF4.5 and NPF4.6 in Xenopus Oocytes. Frontiers in Plant Science. 11(44). DOI: 10.3389/fpls.2020.00144
Liu J, Fernandez D , Gao YJ, Silvie P , Gao YD, Dai GH. (2020). Enzymology, Histological and Ultrastructural Effects of Ar-Turmerone on Culex pipiens pallens Larvae. Insects. 11(6). DOI: 10.3390/insects11060336
Marie L, Abdallah C, Campa C , Courtel P, Bordeaux M, Navarini L, Lonzarich V, Skovmand Bosselmann A, Turreira-Garcia N, Alpizar E, Georget F, Breitler JC, Etienne H, Bertrand B. (2020). G × E interactions on yield and quality in Coffea arabica: new F1 hybrids outperform American cultivars. Euphytica 216, 78. doi.org/10.1007/s10681-020-02608-8
Martin P, Silvie P , Marnotte P, Goebel FR. (2020). A Decision Support System for Determining Sugarcane Pest Reservoir. Sugar tech. DOI: 10.1007/s12355-020-00826-x
Masson AS, Bich HH, Simonin M, Thi HN, Czernic P, Moulin L, Bellafiore S . (2020). Deep modifications of the microbiome of rice roots infected by the parasitic nematode Meloidogyne graminicola in highly infested fields in Vietnam. Fems Microbiol. Ecol. doi: 10.1093/femsec/fiaa099.
Mota APZ, Fernandez D,
Arraes FBM, Petitot AS
, de Melo BP, de Sa MEL, Grynberg P, Saraiva MAP, Guimaraes PM, Brasileiro ACM, Albuquerque EVS, Danchin EGJ, Grossi-de-Sa MF. (2020). Evolutionarily conserved plant genes responsive to root-knot nematodes identified by comparative genomics. Mol Genet Genomics.
DOI: 10.1007/s00438-020-01677-7
Nguyen TH, Mai HTT, Moukouanga D, Lebrun M, Bellafiore S , Champion A (2020). CRISPR/Cas9-Mediated Gene Editing of the Jasmonate Biosynthesis OsAOC Gene in rice. Methods Mol Biol. doi: 10.1007/978-1-0716-0142-6_15.
Petitot AS , Dereeper A, Da Silva C, Guy J, Fernandez D . (2020). Analyses of the Root-Knot Nematode (Meloidogyne graminicola) Transcriptome during Host Infection Highlight Specific Gene Expression Profiling in Resistant Rice Plants. Pathogens 2020, 9, 644. doi:10.3390/pathogens9080644
Phan NT, Orjuela J, Danchin EGJ, Klopp C, Perfus-Barbeoch L, Kozlowski DK, Koutsovoulos GD, Lopez-Roques C, Bouchez O, Zahm M, Besnard G, Bellafiore S. (2020). Genome structure and content of the rice root-knot nematode (Meloidogyne graminicola). Ecology and Evolution. DOI: 10.1002/ece3.6680
Portaluri V, Thomas F, Guyader S, Jamin E, Bertrand B , Remaud GS, Schievano E, Mammi S, Guercia E, Navarini L. (2020). Limited genotypic and geographic variability of 16-O-methylated diterpene content in Coffea arabica green beans. Food Chemistry. 239. DOI: 10.1016/j.foodchem.2020.127129
Pruvot-Woehl S, Krishnan S, Solano W, Schilling T, Toniutti L, Bertrand B , Montagnon C. (2020). Authentication of Coffea arabica varieties through DNA fingerprinting and its significance for the coffee sector. Journal of AOAC INTERNATIONAL. doi.org/10.1093/jaocint/qsz003
Read AC, Hutin M , Moscou MJ, Rinaldi FC, Bogdanove AJ (2020). Cloning of the rice Xo1 resistance gene and interaction of the Xo1 protein with the defense-suppressing Xanthomonas effector Tal2h. Mol. Plant Microbe Interact. doi: 10.1094/MPMI-05-20-0131-SC
Roy L, Taudiere A, Papaix J, Blatrix R, Chiron G, Zriki G, Bonato O , Barnagaud JY. (2020). Evaluating the link between predation and pest control services in the mite world. Ecology and Evolution. doi.org/10.1002/ece3.6655
Roman-Reyna V, Luna E, Pesce C, Vancheva T, Chang C, Ziegle J, Bragard C, Koebnik R , Lang JM, Leach .E, Jacobs JM. (2020). Genome Resource of Barley Bacterial Blight and Leaf Streak Pathogen Xanthomonas translucens pv. translucens strain UPB886. 104(1): 13-15. doi.org/10.1094/PDIS-05-19-1103-A
Scalabrin S, Toniutti L, Di Gaspero G, Scaglione D, Magris G, Vidotto M, Pinosio S, Cattonaro F, Magni F, Jurman I, Cerutti M, Suggi Liverani F, Navarini L, Del Terra L, Pellegrino G, Ruosi MR, Vitulo N, Valle G, Pallavicini A, Graziosi G, Klein PE, Bentley N, Murray S, Solano W, Al Hakimi A, Schilling T, Montagnon C, Morgante M, Bertrand B . (2020). A single polyploidization event at the origin of the tetraploid genome of Coffea arabica is responsible for the extremely low genetic variation in wild and cultivated germplasm. Sci. Rep. DOI: 10.1038/s41598-020-61216-7
Sedighian N, Krijger M, Taparia T, Taghavi SM, Wicker E, Van der Wolf JM, Osdaghi E. (2020). Genome Resource of Two Potato Strains of Ralstonia solanacearum Biovar 2 (Phylotype IIB Sequevar 1) and Biovar 2T (Phylotype IIB Sequevar 25) Isolated from Lowlands in Iran. MPMI. 33(7): 872-875. doi: 10.1094/MPMI-02-20-0026-A
Sedighian N, Taghavi SM, HamzehzarghaniH, Van der Wolf JM, Wicker E , Osdaghi E. (2020). Potato-Infecting Ralstonia solanacearum Strains in Iran Expand Knowledge on the Global Diversity of Brown Rot Ecotype of the Pathogen. Phytopathology. doi: 10.1094/PHYTO-03-20-0072-R
Simonin M, Dasilva C, Terzi V, Ngonkeu ELM, Diouf D, Kane A, Béna G, Moulin L. (2020). Influence of plant genotype and soil on the wheat rhizosphere microbiome: Evidences for a core microbiome across eight African and European soils. FEMS Microbiol. Ecol. DOI: 10.1093/femsec/fiaa067
Struelens Q, Silvie P. (2020). Orienting insecticide research in the tropics to meet the sustainable development goals. Curr. Opin. Insect Sci. doi: 10.1016/j.cois.2020.05.015.
Studholme D, Wicker E , Abrare SM, Aspin A, Bogdanove A, Broders K, Dubrow Z, Grant M, Jones JB, Karamura G, Lang J, Leach J, Mahuku G, Nakato GV, Coutinho T, Smith J, Bull CT. (2020). Transfer of Xanthomonas campestris pv. arecae and X. campestris pv. musacearum to X. vasicola (Vauterin) as X. vasicola pv. arecae comb. nov. and X. vasicola pv. musacearum comb. nov. and Description of X. vasicola pv. vasculorum pv. nov. Phytopathology. doi: 10.1094/PHYTO-03-19-0098-LE.
Tall H, Aribi J, Camara S, Pinel-Galzi A, Poulicard N, Fargette D, Hébrard E. (2020). Near-Complete Genome Sequences of Rice Yellow Mottle Virus Isolates from Senegal. Microbiol Resour Announc. doi: 10.1128/MRA.00937-19.
Tekete C, Cunnac S , Doucoure H, Dembele M, Keita I, Sarra S, Dagno K, Koita O, Verdier V. (2020). Characterization of New Races of Xanthomonas oryzae pv. oryzae in Mali Informs Resistance Gene Deployment. Phytopathology. 110(2): 267-277. DOI: 10.1094/PHYTO-02-19-0070-R
Teulet A, Gully D, Rouy Z, Camuel A, Koebnik R , Giraud E, Lassalle F. (2020). Phylogenetic distribution and evolutionary dynamics of nod and T3SS genes in the genus Bradyrhizobium. Microb. Genom. doi: 10.1099/mgen.0.000407
Tibiri EB, Pita JS, Tiendrébéogo F, Bangratz M, Néya JB, Brugidou B , Somé K, Barro N. (2020). Characterization of virus species associated with sweetpotato virus diseases in Burkina Faso. Plant Pathology. DOI: 10.1111/ppa.13190
Tucker MJ, Celli MG, Conteh AB, Taylor DR, Hébrard E, Poulicard N. (2020). First report of Rice stripe necrosis virus infecting rice in Sierra Leone. New Disease Reports (2020) 41, 10. doi.org/10.5197/j.2044-0588.2020.041.010
